Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AFZ7BRO1-domain-containing protein. (824 aa)    
Predicted Functional Partners:
A0A178AX63
Uncharacterized protein.
    
 0.997
A0A178ARH9
Uncharacterized protein.
    
 
 0.983
A0A178B3X9
Charged multivesicular body protein-like protein 6.
    
 0.959
A0A178AEB5
Cysteine proteinase; Belongs to the peptidase C2 family.
    
 0.951
A0A178ARL9
UEV-domain-containing protein.
   
 0.949
A0A178B9S2
Magnesium-dependent phosphatase-1.
    
 0.925
A0A178ADR6
Vacuolar protein sorting-associated protein-like protein VPS4; Belongs to the AAA ATPase family.
   
 0.923
A0A178B344
BRO1-domain-containing protein.
     
 0.912
A0A178BCC5
EF-hand.
  
 
 
 0.897
A0A178AEY2
Snf7-domain-containing protein.
    
 0.877
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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