Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AG13Uncharacterized protein. (280 aa)    
Predicted Functional Partners:
A0A178B6U3
SecY protein.
   
 0.897
A0A178AXG7
ARM repeat-containing protein.
    
 
 0.873
A0A178ABQ2
Cytochrome c oxidase assembly protein COX20, mitochondrial; Involved in the assembly of the cytochrome c oxidase complex. Belongs to the COX20 family.
   
 
 0.823
A0A178B5T6
Mitochondrial export translocase Oxa1.
   
 
 0.821
A0A178AIQ5
COX15-CtaA-domain-containing protein.
   
 
 0.805
A0A178B3R7
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
    
 0.800
A0A178APZ6
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.799
A0A178AWU8
Ribosomal protein S16.
  
 
 0.797
A0A178B6H6
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
   0.788
A0A178AMA8
Uncharacterized protein.
   
 
 0.781
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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