Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AGA4Fe2OG dioxygenase domain-containing protein. (335 aa)    
Predicted Functional Partners:
A0A178AE83
DNA-3-methyladenine glycosylase-like protein.
     
 0.619
A0A178B7T7
DNA binding methylated-DNA--cysteine S-methyltransferase.
  
  
 0.617
A0A178AQ74
Fe2OG dioxygenase domain-containing protein.
   
  
 0.548
A0A178BAN5
Trm112p-domain-containing protein.
   
 
 0.548
A0A178ACA9
MTS domain-containing protein.
      
 0.461
A0A178AET0
3-oxo-5-alpha-steroid 4-dehydrogenase.
      
 0.454
A0A178ABC6
CRIB domain-containing protein.
     
  0.449
A0A178AYZ3
Alpha-actinin-2.
     
  0.449
A0A178AYN8
Gcd10p-domain-containing protein.
   
  
 0.446
A0A178A9C8
Uncharacterized protein.
     
  0.405
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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