Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AGF7Uncharacterized protein. (636 aa)    
Predicted Functional Partners:
A0A178APJ5
Rho1 guanine nucleotide exchange factor 1.
    
 0.855
A0A178BD44
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.723
A0A178B816
CENP-T_C domain-containing protein.
   
 0.683
A0A178AH62
WSC domain-containing protein.
    
 0.670
A0A178ARF2
Putative nuclear transport factor 2.
    
  0.602
A0A178BAY1
NPL4-domain-containing protein.
    
  0.602
A0A178ABR2
FKS1_dom1 domain-containing protein.
    
 0.546
A0A178A9I8
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.530
A0A178ACH5
Uncharacterized protein.
    
  0.530
A0A178B6J4
Uncharacterized protein.
     
 0.528
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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