Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AGG9Uncharacterized protein. (426 aa)    
Predicted Functional Partners:
A0A178ANQ5
Ras GEF.
    
  0.553
A0A178AG47
Molybdopterin binding oxidoreductase.
     
  0.526
A0A178AN68
Molybdopterin binding oxidoreductase.
     
  0.526
A0A178AQS8
Sulfite oxidase-like protein.
     
  0.526
A0A178BD36
Molybdopterin binding oxidoreductase.
     
  0.526
A0A178B5T5
Ubiquitin carboxyl-terminal hydrolase.
    
  0.489
A0A178AXY7
ATP-binding cassette transporter-like protein.
    
 0.482
A0A178B7A9
ABC transporter domain-containing protein.
    
 0.482
A0A178AC41
RING-type domain-containing protein.
    
  0.473
A0A178ACN2
Iron-sulfur clusters transporter atm1, mitochondrial.
    
 0.470
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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