Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AGH2Uncharacterized protein. (833 aa)    
Predicted Functional Partners:
A0A178B125
Ubiquitin-like protein.
   
 0.818
A0A178B057
ARM repeat-containing protein.
   
   0.814
A0A178B371
Cysteine proteinase.
   
 0.793
A0A178ADY3
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.651
A0A178B0G1
RanBD1 domain-containing protein.
   
 
 0.651
A0A178AN35
Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.
    
 
 0.650
A0A178BF73
Mitochondrial thiamine pyrophosphate carrier 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.643
A0A178A9A4
Prp19-domain-containing protein.
    
   0.575
A0A178AVS0
Apses-domain-containing protein.
    
 
 0.570
A0A178AL64
Uncharacterized protein.
   
   0.568
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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