Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AGJ0Cse1-domain-containing protein. (958 aa)    
Predicted Functional Partners:
A0A178AEL5
Importin N-terminal domain-containing protein.
   
 0.996
A0A178B6J9
Importin subunit alpha; Belongs to the importin alpha family.
  
 0.995
A0A178AAZ9
ARM repeat-containing protein.
   
 0.986
A0A178B8S7
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 
 0.970
A0A178B0G1
RanBD1 domain-containing protein.
   
 
 0.969
A0A178AJQ2
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.947
A0A178B7U1
ARM repeat-containing protein.
   
 
 0.941
A0A178BBE0
SEC7 domain-containing protein.
   
 
 0.908
A0A178ABX0
ARM repeat-containing protein.
   
 
 0.904
A0A178B7M8
ARM repeat-containing protein.
   
  
 0.830
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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