Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A178AGK3FMN-linked oxidoreductase. (425 aa)    
Predicted Functional Partners:
A0A178B520
NAD(P)-binding protein.
   
    0.563
A0A178AQM4
NAD(P)-binding protein.
   
    0.559
A0A178BB31
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
   0.551
A0A178AHM6
Electron transfer flavo protein, beta subunit.
  
 0.526
A0A178AIB6
Nitroreductase.
    
 0.504
A0A178B001
Electron transfer flavo protein-like protein subunit alpha.
   
 0.500
A0A178B313
NAD(P)-bd_dom domain-containing protein.
   
 
  0.470
A0A178AAB3
Uncharacterized protein.
   
    0.446
A0A178AGK6
Uncharacterized protein.
   
    0.446
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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