Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A178AGL8DUF1769-domain-containing protein. (418 aa)    
Predicted Functional Partners:
A0A178ABM8
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.659
A0A178AKM9
G domain-containing protein.
    
 
 0.552
A0A178AR39
Uncharacterized protein.
    
 
 0.552
A0A178AYP1
E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.
    
 
 0.552
A0A178AZC1
RING/U-box.
    
   0.538
A0A178AX25
Cullin-domain-containing protein; Belongs to the cullin family.
    
 
 0.443
A0A178AZQ0
Cullin-domain-containing protein; Belongs to the cullin family.
    
 
 0.443
A0A178A891
Serine/threonine-protein phosphatase.
  
  
 0.438
A0A178ABV4
Serine/threonine-protein phosphatase.
  
  
 0.438
A0A178AIS5
Metallo-dependent phosphatase.
  
  
 0.438
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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