Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AH48Uncharacterized protein. (251 aa)    
Predicted Functional Partners:
A0A178AUK6
Uncharacterized protein.
    
 0.707
A0A178B253
DHR10 domain-containing protein.
    
 0.694
A0A178AZ10
Spc24-domain-containing protein.
    
 0.689
A0A178AV46
Uncharacterized protein.
    
 0.684
A0A178B4Z7
Uncharacterized protein.
    
 0.670
A0A178BDB5
Peptidase_M10 domain-containing protein.
    
 0.660
A0A178B164
WD40 repeat-like protein.
    
 0.659
A0A178AB63
Uncharacterized protein.
    
 0.658
A0A178AEH8
E3 ubiquitin-protein ligase.
    
 0.651
A0A178B2G2
Uncharacterized protein.
    
 0.634
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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