Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
A0A178AH86Nucleotidyltransferase. (711 aa)    
Predicted Functional Partners:
A0A178AM56
POLXc domain-containing protein.
     
 0.887
A0A178ASB7
SPOC domain-like protein.
    
 0.881
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
   
 0.825
A0A178AA73
DNA ligase.
  
 0.817
A0A178AFC4
DNA ligase.
  
 0.817
A0A178AGC0
PNK3P-domain-containing protein.
    
 0.805
A0A178B477
PNK3P-domain-containing protein.
    
 0.805
A0A178AG05
DNA ligase.
   
 0.796
A0A178AHG6
ATP-dependent DNA helicase II subunit 1.
    
 0.795
A0A178AHJ2
Uncharacterized protein.
    
 0.795
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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