Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AHI4Alpha/beta-hydrolase. (241 aa)    
Predicted Functional Partners:
A0A178A8J0
Allantoinase.
   
 
 0.584
A0A178B476
Alpha/beta-hydrolase.
  
    0.528
A0A178AAD7
Alpha/beta-hydrolase.
  
     0.516
A0A178B412
Abhydrolase_3 domain-containing protein.
  
     0.515
A0A178B4X8
Abhydrolase_3 domain-containing protein.
  
     0.512
A0A178AVI1
Alpha/beta-hydrolase.
  
     0.508
A0A178B9B4
Alpha/beta hydrolase fold-3.
  
     0.499
A0A178ARE2
Vegetative specific protein H5.
  
     0.496
A0A178AZL7
Thimet oligopeptidase.
     
 0.468
A0A178B0F3
Alpha/beta-hydrolase.
  
    0.457
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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