Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AHR7RNA-binding domain-containing protein. (356 aa)    
Predicted Functional Partners:
A0A178AZX0
Cell cycle control protein cwf14.
    
  0.859
A0A178B5U5
T-complex protein 1.
   
  0.814
A0A178A7Q7
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
  0.780
A0A178AJP9
78 kDa glucose-regulated protein-like protein; Belongs to the heat shock protein 70 family.
   
  0.780
A0A178B941
Uncharacterized protein.
    
 0.737
A0A178AP47
RNA-binding domain-containing protein.
  
 
 0.709
A0A178ABG9
HSP70-domain-containing protein.
   
  0.690
A0A178BDU3
Heat shock protein-like protein; Belongs to the heat shock protein 70 family.
   
  0.690
A0A178AH91
RNA-binding domain-containing protein.
  
 
 0.665
A0A178B658
Small nuclear ribonucleoprotein Sm D3.
    
 0.634
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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