Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AHU3Uncharacterized protein. (845 aa)    
Predicted Functional Partners:
A0A178AN54
Mortality factor 4-like protein-like protein 1.
   
 
 0.930
A0A178AHT2
Peptidyl-prolyl cis-trans isomerase.
    
 
 0.922
A0A178B427
Sister chromatid cohesion protein.
   
 
 0.910
A0A178AFB3
PHD finger domain-containing protein.
  
 
  0.890
A0A178AU90
DNA-directed RNA polymerases I.
    
  0.886
A0A178AZP5
SET domain-containing protein.
   
 0.881
A0A178ATU7
PHD domain-containing protein.
   
  0.867
IQ06DRAFT_2455
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
     
 0.865
A0A178AZ23
Uncharacterized protein.
  
 
  0.861
A0A178A942
Hist_deacetyl domain-containing protein.
     
  0.859
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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