Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
A0A178AI00Galactose oxidase. (433 aa)    
Predicted Functional Partners:
A0A178APH4
POZ domain-containing protein; Belongs to the SKP1 family.
    
  0.954
A0A178AZC1
RING/U-box.
    
  0.919
A0A178AFH0
Uncharacterized protein.
    
 0.829
A0A178AA78
DRIM domain-containing protein.
     
  0.802
A0A178B6E6
Molybdenum cofactor biosynthesis prote.
    
   0.802
A0A178B7W3
GTP cyclohydrolase subunit MoaC.
    
   0.802
A0A178ARE4
Ribosomal protein L15.
     
  0.725
A0A178BAQ9
UBX domain-containing protein.
    
   0.724
A0A178AES4
RING-type domain-containing protein.
    
  0.685
A0A178AXH3
RBR-type E3 ubiquitin transferase.
    
  0.685
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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