Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A178AI49Ankyrin. (856 aa)    
Predicted Functional Partners:
A0A178ADK1
ARF/SAR superfamily; Belongs to the small GTPase superfamily. Arf family.
    
 0.842
A0A178B0S1
Arf GTPase activating protein.
    
 0.793
A0A178AH42
ADP-ribosylation factor GTPase-activating protein 1.
    
 0.776
A0A178AH49
ArfGap-domain-containing protein.
    
 0.720
A0A178BCP0
ArfGap-domain-containing protein.
    
 0.720
A0A178AW09
Ras-related protein rab-like protein-11B.
    
 0.592
A0A178AS51
HlyIII-domain-containing protein.
    
 0.580
A0A178AWB1
HlyIII-domain-containing protein.
    
 0.580
A0A178B4T0
Hemolysin-III channel protein-like protein Izh2.
    
 0.580
A0A178BAQ1
Adiponectin receptor protein 1.
    
 0.580
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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