STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AI89Uncharacterized protein. (483 aa)    
Predicted Functional Partners:
A0A178AQQ6
Reduced viability upon starvation protein.
     
  0.975
A0A178B0N8
BAR-domain-containing protein.
     
  0.975
A0A178BD88
SAC domain-containing protein.
   
 
 0.718
A0A178AS57
Uncharacterized protein.
    
 0.669
A0A178AKN6
WH1-domain-containing protein.
   
 
 0.641
A0A178B324
Polygalacturonase.
   
 
 0.641
A0A178AYB8
Uncharacterized protein.
    
 0.586
A0A178BBB0
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.586
A0A178BD24
Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDC5/Polo subfamily.
    
 0.586
A0A178B1B4
Meiotically up-regulated gene 64 protein.
    
 
 0.579
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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