Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AI90Mitochondrial carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. (321 aa)    
Predicted Functional Partners:
A0A178AFG9
Inositol phosphatase; Belongs to the FBPase class 1 family.
   
  
 0.886
A0A178AKJ0
Malate synthase; Belongs to the malate synthase family.
   
  
 0.864
A0A178ALI7
Isocitrate lyase.
   
  
 0.823
A0A178AXI2
Isocitrate lyase.
   
  
 0.823
A0A178B119
Acyltransferase ChoActase/COT/CPT; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.705
A0A178B620
Uncharacterized protein.
   
    0.638
A0A178ANM4
Glycoside hydrolase.
     
 0.635
A0A178AA79
Calcium-dependent phosphotriesterase.
     
  0.629
A0A178ANH7
NAD(P)-binding protein.
     
  0.629
A0A178AFI2
Uncharacterized protein.
   
  
 0.619
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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