STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AIL0L-lactate dehydrogenase. (389 aa)    
Predicted Functional Partners:
A0A178ADF4
PLP-dependent transferase.
  
 0.878
A0A178AKJ0
Malate synthase; Belongs to the malate synthase family.
  
 
 0.805
A0A178B1W3
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.782
A0A178AJ87
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family.
   
 
  0.779
A0A178AT32
Heme-dependent catalase.
   
 
  0.779
A0A178AJ45
FAD dependent oxidoreductase.
   
 
 0.778
A0A178B6H9
Catalase domain-containing protein.
   
 
  0.776
A0A178AKM7
Isocitrate lyase.
   
 
  0.775
A0A178AXI2
Isocitrate lyase.
   
 
  0.775
A0A178AUI0
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family.
   
 
  0.773
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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