Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AIN1NB-ARC domain-containing protein. (549 aa)    
Predicted Functional Partners:
A0A178AW76
Alpha-L-arabinofuranosidase B.
     
 0.694
A0A178AFU6
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.689
A0A178ANH7
NAD(P)-binding protein.
    
  0.620
A0A178B1X1
Uncharacterized protein.
    
  0.614
A0A178B324
Polygalacturonase.
    
  0.613
A0A178A8Q7
Uncharacterized protein; Belongs to the glycosyl hydrolase 2 family.
     
  0.589
A0A178ANM4
Glycoside hydrolase.
     
  0.589
A0A178AQW3
Nucleoside diphosphate kinase.
   
  0.541
A0A178BDP7
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.504
A0A178ARB9
Galactokinase.
   
  0.486
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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