Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A178AIP9DNA polymerase epsilon subunit C. (167 aa)    
Predicted Functional Partners:
A0A178ASY3
Histone-fold-containing protein.
   
 0.999
A0A178AFB8
TBP-domain-containing protein.
    
 
 0.977
A0A178AQV5
Uncharacterized protein.
    
 
 0.975
A0A178ALU4
Histone-fold-containing protein.
    
 0.941
A0A178AHW9
BTB domain-containing protein.
    
 
 0.862
A0A178B1S8
Uncharacterized protein.
    
   0.862
A0A178B543
Zn(2)-C6 fungal-type domain-containing protein.
    
 
 0.862
A0A178BAK1
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.861
A0A178AS32
Cyclin-like protein.
    
 
 0.856
A0A178AL01
SRF-TF-domain-containing protein.
     
 0.853
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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