Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AIV5Uncharacterized protein. (584 aa)    
Predicted Functional Partners:
A0A178BBB0
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.835
A0A178AT62
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.797
A0A178B6I4
ENTH-domain-containing protein.
   
 0.778
A0A178B8K2
ENTH-domain-containing protein.
   
 0.778
A0A178AQ92
Replication protein A, subunit RPA32.
    
 0.776
A0A178AS57
Uncharacterized protein.
    
 0.772
A0A178B7B9
ANTH-domain-containing protein.
    
 0.765
A0A178ABA4
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.762
A0A178ANR0
Protein kinase domain-containing protein.
    
 0.757
A0A178AYK3
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
 0.723
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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