Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AJ50DUF1766-domain-containing protein. (630 aa)    
Predicted Functional Partners:
A0A178ARQ9
Antiviral helicase.
    
 0.722
A0A178AN64
Uncharacterized protein.
    
 0.716
A0A178AXJ5
TPR-like protein.
    
 0.713
A0A178B2F0
CDC73-domain-containing protein.
    
 0.707
A0A178AAY8
TPR-like protein.
    
 0.664
A0A178AEK2
TPR_REGION domain-containing protein.
    
 0.664
A0A178AT86
Paf1-domain-containing protein.
    
 0.594
A0A178ATG4
Uncharacterized protein.
    
 0.594
A0A178AFW6
Uncharacterized protein.
    
 0.570
A0A178ALS2
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.570
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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