Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AJ59Arrestin. (537 aa)    
Predicted Functional Partners:
A0A178AL64
Uncharacterized protein.
    
   0.802
A0A178B057
ARM repeat-containing protein.
    
   0.794
A0A178AMZ6
BZIP domain-containing protein.
   
 0.743
A0A178ASB0
BZIP domain-containing protein.
   
 0.743
A0A178A9L6
Uncharacterized protein.
    
 0.712
A0A178AMH5
SNF5-domain-containing protein.
    
 0.699
A0A178B253
DHR10 domain-containing protein.
    
 0.699
A0A178A942
Hist_deacetyl domain-containing protein.
    
 0.697
A0A178B6C8
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.697
A0A178B2G2
Uncharacterized protein.
    
 0.689
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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