Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AJ84PCI domain-containing protein. (463 aa)    
Predicted Functional Partners:
A0A178B1E0
PCI domain-containing protein.
   
 0.993
A0A178ANY2
Uncharacterized protein.
    
 0.990
A0A178AZW0
Uncharacterized protein.
   
 0.990
A0A178AGN6
EF-hand.
    
 0.967
A0A178AR43
Mov34-domain-containing protein.
   
 0.948
A0A178B0G1
RanBD1 domain-containing protein.
     
 0.905
A0A178ALN2
Small nuclear ribonucleo protein F.
   
 
 0.901
A0A178AXW7
Uncharacterized protein.
     
 0.899
A0A178BB14
PCI domain-containing protein.
    
  0.874
A0A178A879
EF-hand superfamily Ca2+-modulated protein.
    
 0.866
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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