A0A178AJ98 protein (Stagonospora sp. SRC1lsM3a)

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Score

A0A178AJ98

Uncharacterized protein. (255 aa)

Predicted Functional Partners:

A0A178AC93

0.992

A0A178B0R2

0.992

A0A178BDW4

0.992

A0A178AD25

0.989

A0A178B658

0.988

A0A178A9I2

0.984

A0A178B3Q2

0.983

LSM5

0.980

LSM8

0.971

LSM3

0.965

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A178A9I2	A0A178AC93	A0A178A9I2	A0A178AC93	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D2.	0.999
A0A178A9I2	A0A178AD25	A0A178A9I2	A0A178AD25	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.995
A0A178A9I2	A0A178AJ98	A0A178A9I2	A0A178AJ98	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.984
A0A178A9I2	A0A178B0R2	A0A178A9I2	A0A178B0R2	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
A0A178A9I2	A0A178B3Q2	A0A178A9I2	A0A178B3Q2	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm7.	0.999
A0A178A9I2	A0A178B658	A0A178A9I2	A0A178B658	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D3.	0.995
A0A178A9I2	A0A178BDW4	A0A178A9I2	A0A178BDW4	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein G.	0.998
A0A178A9I2	LSM3	A0A178A9I2	A0A178ADJ4	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A178A9I2	LSM5	A0A178A9I2	A0A178BCJ0	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
A0A178A9I2	LSM8	A0A178A9I2	A0A178B2F1	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A178AC93	A0A178A9I2	A0A178AC93	A0A178A9I2	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A178AC93	A0A178AD25	A0A178AC93	A0A178AD25	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
A0A178AC93	A0A178AJ98	A0A178AC93	A0A178AJ98	Small nuclear ribonucleoprotein Sm D2.	Uncharacterized protein.	0.992
A0A178AC93	A0A178B0R2	A0A178AC93	A0A178B0R2	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
A0A178AC93	A0A178B3Q2	A0A178AC93	A0A178B3Q2	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm7.	0.999
A0A178AC93	A0A178B658	A0A178AC93	A0A178B658	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D3.	0.999
A0A178AC93	A0A178BDW4	A0A178AC93	A0A178BDW4	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein G.	0.999
A0A178AC93	LSM3	A0A178AC93	A0A178ADJ4	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A178AC93	LSM5	A0A178AC93	A0A178BCJ0	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.998
A0A178AC93	LSM8	A0A178AC93	A0A178B2F1	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998