Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AK29Uncharacterized protein. (285 aa)    
Predicted Functional Partners:
A0A178B8J5
Uncharacterized protein.
    
 0.722
A0A178AIH4
ARM repeat-containing protein.
    
 0.650
A0A178BA50
WD40 repeat-like protein.
    
 0.603
A0A178B048
Kinase-like protein; Belongs to the protein kinase superfamily.
    
 0.595
A0A178AQW3
Nucleoside diphosphate kinase.
    
  0.574
A0A178BBM4
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.572
A0A178B9G5
Peptidase C50 domain-containing protein.
    
 0.567
A0A178AHI1
Uncharacterized protein.
    
 0.564
A0A178BB67
Uncharacterized protein.
    
 0.564
A0A178B117
Uncharacterized protein.
    
 0.558
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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