Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AKM5Uncharacterized protein. (782 aa)    
Predicted Functional Partners:
A0A178AGU2
ClpP/crotonase.
 
 0.991
A0A178AKD0
ClpP/crotonase.
  
 0.971
A0A178AT90
Uncharacterized protein.
  
 0.971
A0A178AME6
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.915
A0A178AG11
Acyl-CoA dehydrogenase NM domain-like protein.
  
 0.893
A0A178AW54
Uncharacterized protein.
  
 0.893
A0A178AD46
Malonyl-CoA-acyl carrier protein-like protein transacylase.
  
 
 0.885
A0A178AIB1
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.861
A0A178ARN0
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.861
A0A178AW10
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.846
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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