Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A178AL53Galactose oxidase. (346 aa)    
Predicted Functional Partners:
A0A178BCC5
EF-hand.
    
 0.923
A0A178AM97
WD_REPEATS_REGION domain-containing protein.
    
 0.919
A0A178AX25
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.911
A0A178AZQ0
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.911
A0A178APX6
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.909
A0A178AE20
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.861
A0A178AUD8
Protein transport protein Sec24.
    
 0.838
A0A178AAZ8
Uncharacterized protein.
     
 0.823
A0A178ALZ2
DNA-binding protein.
    
   0.815
A0A178AZC1
RING/U-box.
    
 0.807
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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