Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AL9940S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (202 aa)    
Predicted Functional Partners:
A0A178AEN0
Ribosomal protein S12/S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.998
A0A178AHK1
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.998
A0A178ANE0
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.998
A0A178APA0
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.998
A0A178ARD9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.998
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 0.998
A0A178B3L9
Ribosomal protein S7; Belongs to the universal ribosomal protein uS7 family.
   
 0.998
A0A178B4A3
40S ribosomal protein-like protein S19.
   
 0.998
A0A178ACB9
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.997
A0A178AKD5
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.997
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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