Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ALA6Uncharacterized protein. (414 aa)    
Predicted Functional Partners:
A0A178AQL2
Uncharacterized protein.
    
  0.931
A0A178AQJ9
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.679
A0A178BDG9
NuA4-domain-containing protein.
    
 0.662
A0A178AE03
SANT_DAMP1_like domain-containing protein.
    
 0.655
A0A178AYJ3
Enhancer of polycomb-like protein.
    
 0.649
A0A178AZC2
CT20-domain-containing protein.
    
 0.641
A0A178AFW4
Uncharacterized protein.
    
 0.619
A0A178AR26
WD40 repeat-like protein.
    
 0.601
A0A178ACR6
Actin/actin-like protein; Belongs to the actin family.
    
 0.587
A0A178AHH3
YL1-domain-containing protein.
    
 0.574
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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