Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ALB5Uncharacterized protein. (1245 aa)    
Predicted Functional Partners:
A0A178B0Q2
Apses transcription factor-like protein.
    
 0.896
A0A178AGB3
Pkinase-domain-containing protein.
    
 0.805
A0A178B9N7
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.805
A0A178AFA3
Apses-domain-containing protein.
    
 0.791
A0A178B2L4
DNA repair protein rad18.
   
 0.728
A0A178AKM6
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.710
A0A178AQH8
UBC-like protein.
    
 0.707
A0A178AGW5
HTH APSES-type domain-containing protein.
    
  0.674
A0A178BC27
Vezatin domain-containing protein.
   
 0.674
IQ06DRAFT_8970
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.674
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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