Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ALW1Uncharacterized protein. (113 aa)    
Predicted Functional Partners:
A0A178B1A8
Uncharacterized protein.
    
  0.548
A0A178AF97
Guanylate kinase.
    
 0.447
A0A178APY8
Uncharacterized protein.
    
 0.447
A0A178A8Y4
Kinase-like protein.
    
  0.444
A0A178AB53
Alternative oxidase.
    
  0.444
A0A178B0G5
Protein kinase domain-containing protein.
    
  0.444
A0A178B228
ANK_REP_REGION domain-containing protein.
    
  0.444
A0A178BAC0
Uncharacterized protein.
    
  0.444
A0A178BC35
HET-domain-containing protein.
    
  0.444
A0A178APW8
GRIP domain-containing protein.
    
  0.437
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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