Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ALW7Uncharacterized protein. (202 aa)    
Predicted Functional Partners:
A0A178B0P9
Putative rRNA pseudouridine synthase.
   
 
 0.886
A0A178AFE0
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.873
A0A178B8D8
Translation initiation factor Eif4e; Belongs to the eukaryotic initiation factor 4E family.
   
 
 0.852
A0A178ANL6
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.848
A0A178AM19
HTH La-type RNA-binding domain-containing protein.
 
      0.847
A0A178ANE0
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.815
A0A178B6N3
WD_REPEATS_REGION domain-containing protein.
    
 0.777
A0A178APE4
KH domain-containing protein.
   
   0.725
A0A178ATD8
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.710
A0A178AHQ2
Uncharacterized protein.
   
 
 0.701
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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