Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178ALY7Uncharacterized protein. (348 aa)    
Predicted Functional Partners:
A0A178B0C2
Uncharacterized protein.
    
 0.971
A0A178ABZ5
Uncharacterized protein.
    
 0.936
A0A178AB55
50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 0.919
A0A178B090
Ribonuclease III.
   
 0.914
A0A178AH85
MRP-L46 domain-containing protein.
   
  0.903
A0A178AMA8
Uncharacterized protein.
   
 0.901
A0A178BCK0
Uncharacterized protein.
   
 
 0.901
A0A178AQ02
Mitochondrial 54S ribosomal protein YmL9.
   
 0.898
A0A178B841
DASH complex, subunit Spc19.
     
 0.889
A0A178B7T9
Uncharacterized protein.
   
 0.887
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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