Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AM27Chord-domain-containing protein. (319 aa)    
Predicted Functional Partners:
A0A178B6C9
SGS-domain-containing protein.
   
 0.985
A0A178ASL4
Flavin_Reduct domain-containing protein.
   
 0.931
A0A178B3D4
Uncharacterized protein.
   
 0.931
A0A178B758
HSP90-domain-containing protein.
   
 0.931
A0A178AH43
Uncharacterized protein.
   
 
 0.788
A0A178AX42
TPR-like protein.
    
   0.725
A0A178AM00
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase-like protein.
 
      0.676
A0A178AUA5
Hsp90 co-chaperone Cdc37.
    
 
 0.629
A0A178ATD9
Ubiquitin carboxyl-terminal hydrolase.
   
  
 0.594
A0A178B8J4
Ubiquitin carboxyl-terminal hydrolase.
   
  
 0.594
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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