Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AM96Arrestin domain conatining protein. (401 aa)    
Predicted Functional Partners:
A0A178AQ99
Uncharacterized protein.
    
 
 0.969
A0A178BCS8
Inorganic pyrophosphatase.
    
   0.938
A0A178APJ5
Rho1 guanine nucleotide exchange factor 1.
    
 
 0.799
A0A178AYG7
Uncharacterized protein.
    
 
 0.753
A0A178B442
Uncharacterized protein.
    
 
 0.739
IQ06DRAFT_9676
Uncharacterized protein.
    
   0.692
A0A178B691
Rho GTPase-like protein activator.
    
 
 0.524
A0A178ANY3
Uncharacterized protein.
    
 
 0.404
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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