Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AMA0Uncharacterized protein. (462 aa)    
Predicted Functional Partners:
A0A178A963
Mov34-domain-containing protein.
   
 0.984
A0A178AQ75
U-box domain-containing protein.
    
 0.976
A0A178BCM0
VWFA domain-containing protein.
   
 0.969
A0A178AJZ6
HECT domain-containing protein.
    
 0.964
A0A178AWF3
UV excision repair protein Rad23.
   
 0.962
A0A178B1W0
Uncharacterized protein.
    
 0.959
A0A178B2P8
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.959
A0A178AKY6
26S proteasome subunit P45; Belongs to the AAA ATPase family.
    
 0.955
A0A178AB20
PCI domain-containing protein.
   
 0.954
A0A178BE41
26S proteasome subunit P45; Belongs to the AAA ATPase family.
   
 0.947
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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