Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AMD0Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
A0A178AMH5
SNF5-domain-containing protein.
    
 0.495
A0A178AJ31
Uncharacterized protein.
    
  0.483
A0A178B8J5
Uncharacterized protein.
    
  0.473
A0A178AH75
Uncharacterized protein.
    
  0.469
A0A178ALF3
Uncharacterized protein.
    
  0.469
A0A178AUH7
Uncharacterized protein.
    
  0.469
A0A178AXC4
Uncharacterized protein.
    
  0.469
A0A178B427
Sister chromatid cohesion protein.
    
 0.465
A0A178AS64
Amidase signature enzyme.
    
  0.445
A0A178A963
Mov34-domain-containing protein.
    
  0.434
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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