Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AMH8Uncharacterized protein. (577 aa)    
Predicted Functional Partners:
A0A178ARL6
Ubiquitin-conjugating enzyme E2-16 kDa.
   
 0.857
A0A178ABP3
Uncharacterized protein.
    
  0.720
A0A178AZ29
RRN7-type domain-containing protein.
    
  0.720
A0A178AAU4
Ubiquitin-domain-containing protein.
    
  0.681
A0A178AN05
CIA30 family protein.
    
  0.681
A0A178ANK9
BZIP domain-containing protein.
    
  0.681
A0A178B8B3
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.653
A0A178AG67
Polyubiquitin.
   
 0.607
A0A178AWJ7
Ubiquitin-domain-containing protein.
   
 0.607
A0A178A9L6
Uncharacterized protein.
    
 0.572
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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