Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
A0A178AMK4Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. (510 aa)    
Predicted Functional Partners:
A0A178BAM7
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.998
A0A178ANK0
Protein prenylyltransferase.
    
 0.989
A0A178BBC8
Uncharacterized protein.
    
 0.986
A0A178B3I1
Ras-domain-containing protein.
   
 0.985
A0A178AK03
Uncharacterized protein.
    
 
 0.977
A0A178B926
Uncharacterized protein.
    
 0.977
A0A178AJZ0
NCA2-domain-containing protein.
    
 0.970
A0A178AVQ5
Uncharacterized protein.
   
 0.963
A0A178AWC4
WW domain-containing protein.
   
 0.963
A0A178AMZ5
Ras-domain-containing protein.
    
 0.945
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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