Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AML6BHLH domain-containing protein. (430 aa)    
Predicted Functional Partners:
A0A178ATN9
Uncharacterized protein.
    
 0.820
A0A178A9I8
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.756
A0A178ACH5
Uncharacterized protein.
    
  0.756
A0A178A8U4
Uncharacterized protein.
    
 0.751
A0A178AMQ9
Uncharacterized protein.
    
 0.751
A0A178B0Y8
PAS domain-containing protein.
    
 0.751
A0A178AJM7
Uncharacterized protein.
    
  0.750
A0A178ARF2
Putative nuclear transport factor 2.
    
  0.750
A0A178ALZ7
Uncharacterized protein.
     
  0.720
A0A178AN57
DNA repair protein.
     
  0.720
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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