Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
A0A178AMM6RNA helicase. (803 aa)    
Predicted Functional Partners:
A0A178A7U5
NUC153 domain-containing protein.
   
 
 0.997
A0A178B7S8
Utp14-domain-containing protein.
   
 0.996
A0A178AGK7
TRAUB-domain-containing protein.
   
 0.995
A0A178B4P4
BP28CT domain-containing protein.
   
 0.994
A0A178AJM9
NUC153 domain-containing protein.
   
 0.993
A0A178AXW3
RNA helicase.
  
  
0.992
A0A178AD35
rRNA processing protein-like protein Bystin.
   
 0.991
A0A178AYF1
Nop domain-containing protein.
  
 0.991
A0A178ACU0
U3 small nucleolar RNA-associated protein 22.
   
 0.988
A0A178ALR9
Uncharacterized protein.
   
 
 0.988
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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