Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AMQ9Uncharacterized protein. (824 aa)    
Predicted Functional Partners:
A0A178AAX4
Concanavalin A-like lectin/glucanase.
    
 0.853
A0A178AHV5
Uncharacterized protein.
    
 0.828
A0A178B637
Kinase-like protein; Belongs to the protein kinase superfamily.
    
 0.828
A0A178AJQ0
Uncharacterized protein.
    
 0.816
A0A178B3Z0
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
 0.816
A0A178B853
PLAC8-domain-containing protein.
    
 0.816
A0A178AML6
BHLH domain-containing protein.
    
 0.751
A0A178B609
BHLH domain-containing protein.
    
 0.751
A0A178AMZ6
BZIP domain-containing protein.
    
 0.739
A0A178ASB0
BZIP domain-containing protein.
    
 0.739
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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