Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AMT3Uncharacterized protein. (587 aa)    
Predicted Functional Partners:
A0A178B2M8
RhoGAP-domain-containing protein.
    
 0.632
A0A178A871
Guanine nucleotide-binding protein, beta subunit.
   
 0.631
A0A178BCD2
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
  0.622
A0A178A9Z7
GDPD-domain-containing protein.
    
 0.614
A0A178A9L6
Uncharacterized protein.
   
 0.599
A0A178B0Z6
Cofilin; Belongs to the actin-binding proteins ADF family.
   
 0.595
A0A178B1D3
HAD-like protein.
    
 0.587
A0A178AD06
Kinase-like protein.
   
 0.578
A0A178B8B3
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.571
A0A178B8J5
Uncharacterized protein.
    
  0.563
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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