A0A178AMZ8 protein (Stagonospora sp. SRC1lsM3a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A178AMZ8

ARM repeat-containing protein. (820 aa)

Predicted Functional Partners:

A0A178AZ53

0.951

A0A178BD24

0.946

A0A178AQ75

0.928

A0A178ABK5

0.870

A0A178ASL4

0.849

A0A178B3D4

0.849

A0A178B758

0.849

A0A178B161

0.845

A0A178B1X5

0.845

A0A178B7S6

0.845

Your Current Organism:

Stagonospora sp. SRC1lsM3a

NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A178ABK5	A0A178AMZ8	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	ARM repeat-containing protein.	0.870
A0A178ABK5	A0A178ASL4	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Flavin_Reduct domain-containing protein.	0.876
A0A178ABK5	A0A178B3D4	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.876
A0A178ABK5	A0A178B758	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	HSP90-domain-containing protein.	0.876
A0A178AMZ8	A0A178ABK5	ARM repeat-containing protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.870
A0A178AMZ8	A0A178AQ75	ARM repeat-containing protein.	U-box domain-containing protein.	0.928
A0A178AMZ8	A0A178ASL4	ARM repeat-containing protein.	Flavin_Reduct domain-containing protein.	0.849
A0A178AMZ8	A0A178AZ53	ARM repeat-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.951
A0A178AMZ8	A0A178B161	ARM repeat-containing protein.	Uncharacterized protein.	0.845
A0A178AMZ8	A0A178B1X5	ARM repeat-containing protein.	Hap4_Hap_bind domain-containing protein.	0.845
A0A178AMZ8	A0A178B3D4	ARM repeat-containing protein.	Uncharacterized protein.	0.849
A0A178AMZ8	A0A178B758	ARM repeat-containing protein.	HSP90-domain-containing protein.	0.849
A0A178AMZ8	A0A178B7S6	ARM repeat-containing protein.	Uncharacterized protein.	0.845
A0A178AMZ8	A0A178BD24	ARM repeat-containing protein.	Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. CDC5/Polo subfamily.	0.946
A0A178AQ75	A0A178AMZ8	U-box domain-containing protein.	ARM repeat-containing protein.	0.928
A0A178ASL4	A0A178ABK5	Flavin_Reduct domain-containing protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.876
A0A178ASL4	A0A178AMZ8	Flavin_Reduct domain-containing protein.	ARM repeat-containing protein.	0.849
A0A178ASL4	A0A178AZ53	Flavin_Reduct domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.504
A0A178ASL4	A0A178B161	Flavin_Reduct domain-containing protein.	Uncharacterized protein.	0.654
A0A178ASL4	A0A178B1X5	Flavin_Reduct domain-containing protein.	Hap4_Hap_bind domain-containing protein.	0.654