Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AN03Uncharacterized protein. (619 aa)    
Predicted Functional Partners:
A0A178AMZ6
BZIP domain-containing protein.
   
 0.739
A0A178ASB0
BZIP domain-containing protein.
   
 0.739
A0A178B370
Ribosomal protein S12.
   
 0.718
A0A178B255
Uncharacterized protein.
   
  0.717
A0A178B015
Ribosomal protein-like protein S15.
   
  0.712
A0A178AM36
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
  0.711
A0A178AY17
Uncharacterized protein.
   
 0.706
A0A178AML1
Translational machinery component.
   
 0.705
A0A178AWU8
Ribosomal protein S16.
   
  0.703
A0A178AED8
37S ribosomal protein S25, mitochondrial.
   
 0.700
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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