Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AN14Uncharacterized protein. (92 aa)    
Predicted Functional Partners:
A0A178AEU7
Uncharacterized protein.
     
 0.977
A0A178AZ10
Spc24-domain-containing protein.
    
  0.977
A0A178B0C2
Uncharacterized protein.
    
  0.977
A0A178B4Z7
Uncharacterized protein.
    
  0.977
A0A178AQ26
Uncharacterized protein.
    
 0.976
A0A178B2G2
Uncharacterized protein.
    
  0.976
A0A178B841
DASH complex, subunit Spc19.
     
 0.976
A0A178AB63
Uncharacterized protein.
     
  0.975
A0A178ABZ5
Uncharacterized protein.
     
  0.975
A0A178AV46
Uncharacterized protein.
     
  0.975
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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