Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A178AN37Uncharacterized protein. (340 aa)    
Predicted Functional Partners:
A0A178AG71
SGF29 C-terminal domain-containing protein.
     
  0.607
A0A178AFB8
TBP-domain-containing protein.
    
 0.590
A0A178AHW9
BTB domain-containing protein.
    
 0.590
A0A178B543
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.590
A0A178BDF2
RNA polymerase I-specific transcription initiation factor RRN3.
    
 0.574
A0A178AC16
HIT-like protein.
    
 0.568
A0A178AJL1
Uncharacterized protein.
    
 0.568
A0A178AMH0
HIT-like protein.
    
 0.568
A0A178AMH4
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 
 0.562
A0A178ACH4
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
   
   0.508
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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