Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A178AN49Uncharacterized protein. (964 aa)    
Predicted Functional Partners:
A0A178AS57
Uncharacterized protein.
   
 
 0.941
A0A178BAM6
EF-hand.
   
 0.930
A0A178B950
Uncharacterized protein.
  
  
  0.892
A0A178AHZ1
Uncharacterized protein.
    
 0.886
A0A178B9H1
Uncharacterized protein.
    
 0.886
A0A178AV92
Actin, gamma.
    
 0.844
A0A178AXE3
Actin/actin-like protein; Belongs to the actin family.
    
 0.844
A0A178BBP4
Actin-domain-containing protein; Belongs to the actin family.
    
 0.844
A0A178AX26
C2 domain-containing protein.
    
 0.837
A0A178B691
Rho GTPase-like protein activator.
    
 
 0.809
Your Current Organism:
Stagonospora sp. SRC1lsM3a
NCBI taxonomy Id: 765868
Other names: S. sp. SRC1lsM3a
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